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MappedSparseMatrix.h

// This file is part of Eigen, a lightweight C++ template library
// for linear algebra. Eigen itself is part of the KDE project.
//
// Copyright (C) 2008 Gael Guennebaud <g.gael@free.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// version 3 of the License, or (at your option) any later version.
//
// Alternatively, you can redistribute it and/or
// modify it under the terms of the GNU General Public License as
// published by the Free Software Foundation; either version 2 of
// the License, or (at your option) any later version.
//
// Eigen is distributed in the hope that it will be useful, but WITHOUT ANY
// WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License or the
// GNU General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public
// License and a copy of the GNU General Public License along with
// Eigen. If not, see <http://www.gnu.org/licenses/>.

#ifndef EIGEN_MAPPED_SPARSEMATRIX_H
#define EIGEN_MAPPED_SPARSEMATRIX_H

/** \class MappedSparseMatrix
  *
  * \brief Sparse matrix
  *
  * \param _Scalar the scalar type, i.e. the type of the coefficients
  *
  * See http://www.netlib.org/linalg/html_templates/node91.html for details on the storage scheme.
  *
  */
template<typename _Scalar, int _Flags>
struct ei_traits<MappedSparseMatrix<_Scalar, _Flags> > : ei_traits<SparseMatrix<_Scalar, _Flags> >
{};

template<typename _Scalar, int _Flags>
00042 class MappedSparseMatrix
  : public SparseMatrixBase<MappedSparseMatrix<_Scalar, _Flags> >
{
  public:
    EIGEN_SPARSE_GENERIC_PUBLIC_INTERFACE(MappedSparseMatrix)

  protected:
    enum { IsRowMajor = Base::IsRowMajor };

    int m_outerSize;
    int m_innerSize;
    int m_nnz;
    int* m_outerIndex;
    int* m_innerIndices;
    Scalar* m_values;

  public:

    inline int rows() const { return IsRowMajor ? m_outerSize : m_innerSize; }
    inline int cols() const { return IsRowMajor ? m_innerSize : m_outerSize; }
    inline int innerSize() const { return m_innerSize; }
    inline int outerSize() const { return m_outerSize; }
    inline int innerNonZeros(int j) const { return m_outerIndex[j+1]-m_outerIndex[j]; }

    //----------------------------------------
    // direct access interface
    inline const Scalar* _valuePtr() const { return m_values; }
    inline Scalar* _valuePtr() { return m_values; }

    inline const int* _innerIndexPtr() const { return m_innerIndices; }
    inline int* _innerIndexPtr() { return m_innerIndices; }

    inline const int* _outerIndexPtr() const { return m_outerIndex; }
    inline int* _outerIndexPtr() { return m_outerIndex; }
    //----------------------------------------

    inline Scalar coeff(int row, int col) const
    {
      const int outer = RowMajor ? row : col;
      const int inner = RowMajor ? col : row;

      int start = m_outerIndex[outer];
      int end = m_outerIndex[outer+1];
      if (start==end)
        return Scalar(0);
      else if (end>0 && inner==m_innerIndices[end-1])
        return m_values[end-1];
      // ^^  optimization: let's first check if it is the last coefficient
      // (very common in high level algorithms)

      const int* r = std::lower_bound(&m_innerIndices[start],&m_innerIndices[end-1],inner);
      const int id = r-&m_innerIndices[0];
      return ((*r==inner) && (id<end)) ? m_values[id] : Scalar(0);
    }

    inline Scalar& coeffRef(int row, int col)
    {
      const int outer = RowMajor ? row : col;
      const int inner = RowMajor ? col : row;

      int start = m_outerIndex[outer];
      int end = m_outerIndex[outer+1];
      ei_assert(end>=start && "you probably called coeffRef on a non finalized matrix");
      ei_assert(end>start && "coeffRef cannot be called on a zero coefficient");
      int* r = std::lower_bound(&m_innerIndices[start],&m_innerIndices[end],inner);
      const int id = r-&m_innerIndices[0];
      ei_assert((*r==inner) && (id<end) && "coeffRef cannot be called on a zero coefficient");
      return m_values[id];
    }

    class InnerIterator;

    /** \returns the number of non zero coefficients */
00115     inline int nonZeros() const  { return m_nnz; }

    inline MappedSparseMatrix(int rows, int cols, int nnz, int* outerIndexPtr, int* innerIndexPtr, Scalar* valuePtr)
      : m_outerSize(IsRowMajor?rows:cols), m_innerSize(IsRowMajor?cols:rows), m_nnz(nnz), m_outerIndex(outerIndexPtr),
        m_innerIndices(innerIndexPtr), m_values(valuePtr)
    {}

    #ifdef EIGEN_TAUCS_SUPPORT
    explicit MappedSparseMatrix(taucs_ccs_matrix& taucsMatrix);
    #endif

    #ifdef EIGEN_CHOLMOD_SUPPORT
    explicit MappedSparseMatrix(cholmod_sparse& cholmodMatrix);
    #endif

    #ifdef EIGEN_SUPERLU_SUPPORT
    explicit MappedSparseMatrix(SluMatrix& sluMatrix);
    #endif

    /** Empty destructor */
00135     inline ~MappedSparseMatrix() {}
};

template<typename Scalar, int _Flags>
class MappedSparseMatrix<Scalar,_Flags>::InnerIterator
{
  public:
    InnerIterator(const MappedSparseMatrix& mat, int outer)
      : m_matrix(mat),
        m_outer(outer),
        m_id(mat._outerIndexPtr()[outer]),
        m_start(m_id),
        m_end(mat._outerIndexPtr()[outer+1])
    {}

    template<unsigned int Added, unsigned int Removed>
    InnerIterator(const Flagged<MappedSparseMatrix,Added,Removed>& mat, int outer)
      : m_matrix(mat._expression()), m_id(m_matrix._outerIndexPtr()[outer]),
        m_start(m_id), m_end(m_matrix._outerIndexPtr()[outer+1])
    {}

    inline InnerIterator& operator++() { m_id++; return *this; }

    inline Scalar value() const { return m_matrix._valuePtr()[m_id]; }
    inline Scalar& valueRef() { return const_cast<Scalar&>(m_matrix._valuePtr()[m_id]); }

    inline int index() const { return m_matrix._innerIndexPtr()[m_id]; }
    inline int row() const { return IsRowMajor ? m_outer : index(); }
    inline int col() const { return IsRowMajor ? index() : m_outer; }

    inline operator bool() const { return (m_id < m_end) && (m_id>=m_start); }

  protected:
    const MappedSparseMatrix& m_matrix;
    const int m_outer;
    int m_id;
    const int m_start;
    const int m_end;
};

#endif // EIGEN_MAPPED_SPARSEMATRIX_H

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